why don't you switch to a M90?

a M62 at 16psi on these stock engines is near 250rwhp

there is a guy on bimmerforums that has a DASC(m62) pushed to 16,7 psi on a stock M44 engine

You know that rotrex doesn't have that low revs torque that your eaton was giving you, right?
I know that rotrex are smaller and it's easier to intercooler them because there is a lot of space, but rotrex aren't cheap, plus there aren't rebuilts kit for cheap as for eatons and I wouldn't go that way;)
[hijack mode ON]
are you sure that you don't want a turbo and save the assle of do brackets for the s/c and align it? with the garrett GT series the lag is low because is a dual ball bearing, and over 3000 revs boost is simply istantaneous...
(we know that under 3000 revs we are only saving fuel, but going over 3000 is easy on these cars and it's their nature)
sorry to hijack but in case you want to investigate the turbo route, their spool time, boost threshold here there is a good thread for mazda miatas, look at turbo models, engine displacement and boost vs.revs and you'll see what I mean:
http://www.miataturbo.net/forum/showthread.php?t=26641You'll ask: "WTF miatas if we are in a bmw forum?" => because they have very similar engine to M4x as displacement and revs, so basically you can have a pretty good comparison data. If you was able to align the s/c you'll be more than able to do a turbo conversion (mechanical side), then there is the knowledge side....

[hijack mode off]
making specs for custom pistons for a given CR is not simple... you need to keep in mind valve size, valve distance from the piston(valve lift), headgasket thickness, head chamber volume and a lot more... but pistons for your supercharger build will not be differents for the one made for M42 turbo engine, so search a bit in older posts of this section and you'll see that a lot of pistons makers have done them, so they have the specs for these engines...
P.S: I had a custom made (by me

) M62 intercooler setup and I know what eaton are on these engine, the good part (whine, torque) and the bad part (assle to fit them)
now I'm near ready to fit all parts of my custom turbo setup to see how is my T3 S60 turbo on my M44 engine;)