CePa318IS
It would be great if you could do that, but you'd end up putting the stock piston through the head on the first turn over.
If you're using the stock pistons you would have to get rods that are 3.5mm smaller (I think the m42 crank is 81mm but i cant remember)
or
If you're using the stock rods, you would have to get pistons with a 3.5mm lower compression height (compression height=vertical distance between center of wrist pin and the top of the piston, excluding the dome)
The first option is better, because taller compression height is better for Forced induction...thats the route your going, right?
With a 88mm stroke and a rod length of 136.5mm (is standard 140mm?) the rod ratio would be 1.549:1
Whereas with the 88mm stroke and 140mm rod length the rod ratio is 1.590:1
Increasing the rod ratio reduces rod angularity, which reduces the side loading of the piston against the cylinder wall thrust surfaces.
As you can see its not really an easy choice to make, and the best solution is to go for aftermarket pistons
and rods, that way you can have your cake and eat it!
Hope that helps

Paul