I think it has to do with the flow around the plate when it is semi-closed.
You see, air flows in onion type layers, This is called laminar flow.
The outer layers will flow slower due to surface friction, whereas the inner layers will flow faster as the friction it receives is allot less then the outer layers.
Without getting into a discussion about thermodynamics, i believe the throttle plate sticking half way across the port creates turbulence as the layers mix and the air tries to squeeze through the gap.
Im not sure exactly why this effects throttle response but i assume it has to do with the time it takes air to get from the plenum to the combustion chamber, and this plate blocking the way acts like a sudo-chicane, to what preferably would be the straght road of your intake runner.
Have a look here for some useful articles:
http://www.profblairandassociates.com/RET_Articles.htmlAnd I'm also wondering if the throttle modulation is really as bad as what it's cracked up to be. The only sources I've seen it from are people stating it online, but never from anyone with supporting evidence.
The problem with slide throttle bodies, is that anybody who can justify the expense of buying them is going to keep information to themselves.
Therefore, for the people who do give information out, the information will generally based on limited experience or word of mouth.
I dont have any hands on experience (yet

) of slide throttle assemblies, so what i know about them is based on things i've heard and theoretical ideas.
Paul