hello! sorry for delay onyl just got your pm, not been on here much, lost interest in my car as my new engine is noisy and still using oil from cyl 4, so i need to do some work over christmas. just been driving it an ignoring issues for a while until I have some energy to fix it.
As for MS, I run WS on the original coils, I'd recommend doing this yourself as a starting point, is a straightforward setup that works well. Then you don't need to worry about the cam position sensor at all. I always intended to start WS for simplicity and go sequential ign at some pt, but I started using MS maybe 2 and a half years ago on my M42, and haven't ever felt the need to change from WS, it works great.
As for trigger settings, I can't remember 100% if there are 19 or 20 teeth past the missing teeth at TDC, i'm pretty certain it's 20, though for some reason I have it in my head that I have 114 degrees set in my MS2, suggesting 19! Next time I have my megasquirt fired up I'll check for you, I have MS2 extra though and so work in degrees rather than teeth. What code are you using? What other questions do you have? Feel free to let me know and I'll gladly assist.
Tuning - for safety make sure you enable IAT based retard and use it aggressively when first running the car. Use a map deliberately too retarded when first running the car, use the best fuel you can too. Also start off running your map too rich rather than too lean. Use EGO feedback if not feeling confident. Start off by tuning idle, then revving and holding rpm to get a feel for other rpm values, then start tuning some light load sites at low speed, you'll start to get a picture of what the map will look like by doing this and can make estimations for other sites. Datalog and use megalogviewer to help your understanding, it's a great tool. If you follow the above and make sure you've read the megasquirt docs etc, you should have no reason to worry about running the car on megasquirt. If it's not too late already, set up megasquirt on the standard engine first, then add SC, then retune megasquirt.
Additionally, if your car is still running on Motronic, what I usually do is do some datalogging with MS T'd into the crank sensor, and make sure that on the datalog you have a perfect VR signal under all RPMs and all conditions. A good stable crank signal is critical to getting a great tune.
that was a bit meandering, feel free to hit me with some specifics! Also feel free to send msqs, datalogs etc