diff swap is heaps easy mate. just a bit of fiddling, but nothing too complex.
i put my 3.9 in like last week. in all honestly, i can't notice much of a difference to the 4.1. Apart from the LSD ... obviously, but in terms of acceleration, you wont really miss the 4.1s.
Go for it man.
i got my m40 flywheel last week too. just need to get a lil more shaved off it, then il be slapping it in.